Vijini Mallawaarachchi

Talks

Here are some of my selected talks, seminars, and presentations.

Upcoming Talks

  1. Advances in Microbial Genome Reconstruction and Analysis Using Graph-Based Approaches Invited talk at Genome Informatics, Wellcome Genome Campus, UK, Dec 2026

Invited Talks

  1. Large-Scale Microbial Genomics Analysis with Setonix Pawsey Roadshow @ Flinders University, Australia, Aug 2026
  2. Solving Genomic Puzzles: Computational Methods for Metagenomic Binning The Australian Society for Microbiology (ASM) Hour Seminar Series - Bioinformatics SIG, Australia, Jul 2024
  3. Constructing Metagenome-Assembled Genomes Using Graph Models and Algorithms Monash Genomics and Bioinformatics Platform Informal Seminar, Australia, Nov 2023
  4. Untangling Microbial Communities PeraCom Seminar Series, University of Peradeniya, Sri Lanka, Nov 2023
  5. Computational Methods to Untangle Bacteriophage Genomes STEM at the Tav organised by the Flinders Academic Science Club, Flinders University, Australia, Aug 2023

Contributed Talks

  1. Genome-Resolved Insights into Viral Ecology within Microbial Communities using Phables 20th International Symposium on Microbial Ecology (ISME20), Auckland, New Zealand, Aug 2026
  2. Solving genomic puzzles: computational methods for metagenomic binning SDU-ANU Joint Computational Biology Mini-Symposium, Qingdao, China, Aug 2024
  3. Phables Enables the Analysis of Complete Bacteriophage Genomes from Metagenomes International Conference on Viruses of Microbes (VoM 2024), Cairns, Australia, Jul 2024
  4. Phables: from fragmented assemblies to high-quality bacteriophage genomes Australian Bioinformatics And Computational Biology Society Conference (ABACBS 2023), Australia, Dec 2023
  5. Metagenomic Binning using Assembly Graphs ANU Workshop on Computational Genomics, Canberra, Australia, Aug 2023
  6. Untangling bacteriophages associated with inflammatory bowel disease ECR Award session, The Australian Society for Microbiology Annual National Meeting 2023, Australia, Jul 2023
  7. Untangling bacteriophages associated with inflammatory bowel disease The Australian Society for Microbiology SA/NT Branch Early Career Researcher Awards Night 2023, Apr 2023
  8. Phables: Phage bubbles resolve bacteriophage genomes in viral metagenomic samples Australian Bioinformatics And Computational Biology Society Conference (ABACBS 2022), Australia, Nov 2022
  9. Viral bubbles resolve bacteriophage genomes in metagenomic samples Phage Bites v2.0 Symposium, Bacteriophage Biology and Therapeutics Special Interest Group, Australia, Aug 2022
  10. Using assembly graphs to identify bacteriophages associated with gastrointestinal diseases The Australian Society for Microbiology Annual National Meeting (ASM 2022), Sydney, Jul 2022
  11. MetaCoAG: Binning Metagenomic Contigs via Composition, Coverage & Assembly Graphs 26th International Conference on Research in Computational Molecular Biology (RECOMB 2022), May 2022
  12. GraphBin2: Refined & overlapped binning of metagenomic contigs using assembly graphs 20th International Workshop on Algorithms in Bioinformatics (WABI 2020), Sep 2020
  13. GraphBin: Refined binning of metagenomic contigs using assembly graphs BDSI Interactive Seminar Series organised by the ANU Biological Data Science Institute (BDSI), Sep 2019
  14. Random Forest Classifier based Scheduler Optimization for Web Crawlers 7th ACM International Conference on Software and Computer Applications (ICSCA 2018), Malaysia, Feb 2018